Full API Documentation

WALDO : WHERE PROTEINS ARE

This is a Python library to collect information about proteins from online databases (Uniprot, MGI, ...) and expose it as an easy to use Python library.

waldo.translate(name, input_namespace, output_namespace, session=None)

name = translate(name, input_namespace, output_namespace, session={backend.create_session()})

Translate from one namespace to another.

name : str

input name

input_namespace : str

namespace to translate from (must be a known namespace)

output_namespace : str

namespace to translate to (must be a known namespace)

session : SQLAlchemy sesion object

SQLAlchemy session to use (default: call backend.create_session())

name : str or None

result of translation or None if not found.